Bone Marrow Transplant



Project
OpenSAFELY
Coding system
CTV3 (Read V3) with TPP extensions
Version
2020-04-15
Codelist ID
opensafely/bone-marrow-transplant

Description

Codes indicating a bone marrow transplant has been carried out

Methodology

This codelist was derived by the following method:

  • Read 2 Codelist provided by LSHTM. See references for paper.
  • Codes from Quality Outcome Framework (QOF) were examined and relevant haematological malignancy codes taken
  • Codes from SNOMED were taken by searching for relevant haematological malignancy terms

These 3 lists were mapped into CTV3 by TPP to create one list. This list was examined by 2 people and the following logic applied (see github issue for more detail):

  • Benign terms were removed
  • Other cancer types such as Sarcoma were excluded

References

Signed off by

  • Caroline Morton, EBM Datalab (April 15, 2020)
  • Alex Walker, EBM Datalab (April 11, 2020)

This definition has been computed by taking the manually created full codelist and converting it to a list of rules that define the codelist.

CTV3ID CTV3PreferredTermDesc CTV3Source
7K1Q. Bone marrow transplant CTV3Map_Code_And_Term
7K1Q0 Autologous bone marrow transplant CTV3_Children
7K1Q1 Allograft of bone marrow NEC CTV3Map_Code_And_Term
7K1Qy Other specified graft of bone marrow CTV3Map_Code_And_Term
7K1Qz Graft of bone marrow NOS CTV3Map_Code_And_Term
X20Bc Marrow-treated bone marrow transplant CTV3_Children
X20Bd Syngeneic bone marrow transplant CTV3_Children
X20Be T-cell depleted allogeneic bone marrow graft CTV3_Children
X20Bf Imperfect T-cell depleted allogeneic bone marrow graft CTV3_Children
X20Bg Allogeneic related bone marrow transplant CTV3_Children
X20Bh Allogeneic unrelated bone marrow transplant CTV3_Children
X20Bi Haemopoietic stem cell transplant CTV3_Children
X20Fz Bone marrow transplant disorder High_Level_SNOMED
X20G0 Bone marrow transplant rejection CTV3Map_Code_And_Term
X20G1 Bone marrow transplant failure QOF
X20G3 Disease relapse in transplant marrow High_Level_SNOMED
Xa0fK Peripheral blood stem cell graft CTV3Map_Code_And_Term
Xa3wp Injection of bone marrow - blood cells CTV3_Children
Xa8Ry Allogeneic bone marrow transplant CTV3_Children
XaKK4 Acute graft-versus-host disease CTV3Map_Code_And_Term
XaKKM Chronic graft-versus-host disease CTV3Map_Code_And_Term
XaM83 Allograft of bone marrow from sibling donor CTV3Map_Code_And_Term
XaM84 Allograft of bone marrow from matched unrelated donor CTV3Map_Code_And_Term
XaM85 Allograft of bone marrow from haploidentical donor CTV3Map_Code_And_Term
XaMuA Autologous peripheral blood stem cell transplant CTV3Map_Code_And_Term
XaMuB Syngeneic peripheral blood stem cell transplant CTV3Map_Code_And_Term
XaMuC Allogeneic peripheral blood stem cell transplant CTV3Map_Code_And_Term
XaPt6 Allograft of bone marrow from unmatched unrelated donor CTV3Map_Code_And_Term

Codes in the definition are underlined. Codes in the full codelist are in blue. Related codes not in the codelist are in black.